CRISPRone

CRISPRone report for GCA_000448765.2_ASM44876v2

♦ Seq 1: AVGQ01000036.1 Clostridioides difficile CD34 gcdCD34.contig.36, whole genome shotgun sequence

⇒Summary: seq-len = 8722 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6828-7054 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVGQ01000028.1 Clostridioides difficile CD34 gcdCD34.contig.28, whole genome shotgun sequence

⇒Summary: seq-len = 462225 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 186017-186444 bp]: array | spacers
           [Locus range 389978-390400 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVGQ01000037.1 Clostridioides difficile CD34 gcdCD34.contig.37, whole genome shotgun sequence

⇒Summary: seq-len = 727427 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 486162-486718 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVGQ01000032.1 Clostridioides difficile CD34 gcdCD34.contig.32, whole genome shotgun sequence

⇒Summary: seq-len = 108295 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 60816-62556 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVGQ01000039.1 Clostridioides difficile CD34 gcdCD34.contig.39, whole genome shotgun sequence

⇒Summary: seq-len = 4512 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1311-2128 bp]: array | spacers
           [Locus range 2731-3285 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVGQ01000041.1 Clostridioides difficile CD34 gcdCD34.contig.41, whole genome shotgun sequence

⇒Summary: seq-len = 542794 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 498693-498786 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVGQ01000029.1 Clostridioides difficile CD34 gcdCD34.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 56245 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44891-45650 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVGQ01000035.1 Clostridioides difficile CD34 gcdCD34.contig.35, whole genome shotgun sequence

⇒Summary: seq-len = 91070 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 884-1109 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)