CRISPRone

CRISPRone report for GCA_000448825.2_ASM44882v2

♦ Seq 1: AVGI01000108.1 Clostridioides difficile CD3 gcdCD3.contig.113, whole genome shotgun sequence

⇒Summary: seq-len = 27062 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 19981-21195 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVGI01000132.1 Clostridioides difficile CD3 gcdCD3.contig.139, whole genome shotgun sequence

⇒Summary: seq-len = 2978 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1928-2816 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVGI01000272.1 Clostridioides difficile CD3 gcdCD3.contig.279, whole genome shotgun sequence

⇒Summary: seq-len = 22661 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1920-3528 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVGI01000073.1 Clostridioides difficile CD3 gcdCD3.contig.78, whole genome shotgun sequence

⇒Summary: seq-len = 17104 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 599-1026 bp]: array | spacers
           [Locus range 1629-2053 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVGI01000237.1 Clostridioides difficile CD3 gcdCD3.contig.244, whole genome shotgun sequence

⇒Summary: seq-len = 30331 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3964-4920 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVGI01000232.1 Clostridioides difficile CD3 gcdCD3.contig.239, whole genome shotgun sequence

⇒Summary: seq-len = 34822 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVGI01000118.1 Clostridioides difficile CD3 gcdCD3.contig.123, whole genome shotgun sequence

⇒Summary: seq-len = 10801 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1564-2058 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVGI01000217.1 Clostridioides difficile CD3 gcdCD3.contig.224, whole genome shotgun sequence

⇒Summary: seq-len = 16111 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12244-12999 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVGI01000175.1 Clostridioides difficile CD3 gcdCD3.contig.182, whole genome shotgun sequence

⇒Summary: seq-len = 5095 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2905-3066 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)