CRISPRone

CRISPRone report for GCA_000448845.2_ASM44884v2

♦ Seq 1: AVGJ01000107.1 Clostridioides difficile CD8 gcdCD8.contig.106, whole genome shotgun sequence

⇒Summary: seq-len = 12511 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3160-3784 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVGJ01000187.1 Clostridioides difficile CD8 gcdCD8.contig.186, whole genome shotgun sequence

⇒Summary: seq-len = 50147 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4029-4122 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVGJ01000119.1 Clostridioides difficile CD8 gcdCD8.contig.118, whole genome shotgun sequence

⇒Summary: seq-len = 2950 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1922-2803 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVGJ01000184.1 Clostridioides difficile CD8 gcdCD8.contig.183, whole genome shotgun sequence

⇒Summary: seq-len = 35112 bp; # of CRISPR array = 0; # of cas gene = 6  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVGJ01000211.1 Clostridioides difficile CD8 gcdCD8.contig.210, whole genome shotgun sequence

⇒Summary: seq-len = 21898 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 2010-2696 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVGJ01000153.1 Clostridioides difficile CD8 gcdCD8.contig.152, whole genome shotgun sequence

⇒Summary: seq-len = 8598 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1933-3016 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVGJ01000099.1 Clostridioides difficile CD8 gcdCD8.contig.98, whole genome shotgun sequence

⇒Summary: seq-len = 39138 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 32391-33212 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVGJ01000146.1 Clostridioides difficile CD8 gcdCD8.contig.145, whole genome shotgun sequence

⇒Summary: seq-len = 3215 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 848-1141 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVGJ01000084.1 Clostridioides difficile CD8 gcdCD8.contig.83, whole genome shotgun sequence

⇒Summary: seq-len = 2680 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1484-1902 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVGJ01000171.1 Clostridioides difficile CD8 gcdCD8.contig.170, whole genome shotgun sequence

⇒Summary: seq-len = 37853 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33656-34476 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)