CRISPRone

CRISPRone report for GCA_000448945.2_ASM44894v2

♦ Seq 1: AVGS01000118.1 Clostridioides difficile CD39 gcdCD39.contig.117, whole genome shotgun sequence

⇒Summary: seq-len = 8432 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4691-5307 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVGS01000140.1 Clostridioides difficile CD39 gcdCD39.contig.139, whole genome shotgun sequence

⇒Summary: seq-len = 156284 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90447-91914 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVGS01000079.1 Clostridioides difficile CD39 gcdCD39.contig.78, whole genome shotgun sequence

⇒Summary: seq-len = 12540 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3032-3789 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVGS01000060.1 Clostridioides difficile CD39 gcdCD39.contig.59, whole genome shotgun sequence

⇒Summary: seq-len = 13089 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4286-4710 bp]: array | spacers
           [Locus range 6314-6538 bp]: array | spacers
           [Locus range 8331-9152 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVGS01000129.1 Clostridioides difficile CD39 gcdCD39.contig.128, whole genome shotgun sequence

⇒Summary: seq-len = 44898 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 180-537 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVGS01000151.1 Clostridioides difficile CD39 gcdCD39.contig.150, whole genome shotgun sequence

⇒Summary: seq-len = 20279 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9403-9496 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVGS01000102.1 Clostridioides difficile CD39 gcdCD39.contig.101, whole genome shotgun sequence

⇒Summary: seq-len = 18153 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5106-5266 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVGS01000086.1 Clostridioides difficile CD39 gcdCD39.contig.85, whole genome shotgun sequence

⇒Summary: seq-len = 11366 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3723-4873 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVGS01000126.1 Clostridioides difficile CD39 gcdCD39.contig.125, whole genome shotgun sequence

⇒Summary: seq-len = 35216 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVGS01000072.1 Clostridioides difficile CD39 gcdCD39.contig.71, whole genome shotgun sequence

⇒Summary: seq-len = 57314 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 50878-51437 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)