CRISPRone

CRISPRone report for GCA_000449085.2_ASM44908v2

♦ Seq 1: AVGZ01000028.1 Clostridioides difficile CD46 gcdCD46.contig.27, whole genome shotgun sequence

⇒Summary: seq-len = 240655 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVGZ01000029.1 Clostridioides difficile CD46 gcdCD46.contig.28, whole genome shotgun sequence

⇒Summary: seq-len = 245948 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 352-1041 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVGZ01000020.1 Clostridioides difficile CD46 gcdCD46.contig.19, whole genome shotgun sequence

⇒Summary: seq-len = 28788 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17948-18309 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVGZ01000021.1 Clostridioides difficile CD46 gcdCD46.contig.20, whole genome shotgun sequence

⇒Summary: seq-len = 169229 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 69134-69359 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVGZ01000019.1 Clostridioides difficile CD46 gcdCD46.contig.18, whole genome shotgun sequence

⇒Summary: seq-len = 210657 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 118228-119313 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVGZ01000025.1 Clostridioides difficile CD46 gcdCD46.contig.24, whole genome shotgun sequence

⇒Summary: seq-len = 9413 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5016-6567 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVGZ01000030.1 Clostridioides difficile CD46 gcdCD46.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 518027 bp; # of CRISPR array = 2; # of cas gene = 14  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 248028-250487 bp]: array | spacers
           [Locus range 459369-460184 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVGZ01000018.1 Clostridioides difficile CD46 gcdCD46.contig.17, whole genome shotgun sequence

⇒Summary: seq-len = 307785 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185685-186840 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVGZ01000022.1 Clostridioides difficile CD46 gcdCD46.contig.21, whole genome shotgun sequence

⇒Summary: seq-len = 99524 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 39945-42489 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)