CRISPRone

CRISPRone report for GCA_000449185.2_ASM44918v2

♦ Seq 1: AVHE01000033.1 Clostridioides difficile CD69 gcdCD69.contig.32, whole genome shotgun sequence

⇒Summary: seq-len = 118046 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 55148-55900 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVHE01000042.1 Clostridioides difficile CD69 gcdCD69.contig.41, whole genome shotgun sequence

⇒Summary: seq-len = 67900 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVHE01000046.1 Clostridioides difficile CD69 gcdCD69.contig.45, whole genome shotgun sequence

⇒Summary: seq-len = 151682 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 125744-126302 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVHE01000038.1 Clostridioides difficile CD69 gcdCD69.contig.37, whole genome shotgun sequence

⇒Summary: seq-len = 94568 bp; # of CRISPR array = 1; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 4478-4572 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVHE01000031.1 Clostridioides difficile CD69 gcdCD69.contig.30, whole genome shotgun sequence

⇒Summary: seq-len = 55618 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44871-45166 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVHE01000026.1 Clostridioides difficile CD69 gcdCD69.contig.25, whole genome shotgun sequence

⇒Summary: seq-len = 207573 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 195205-195894 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVHE01000008.1 Clostridioides difficile CD69 gcdCD69.contig.7, whole genome shotgun sequence

⇒Summary: seq-len = 38105 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVHE01000030.1 Clostridioides difficile CD69 gcdCD69.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 204855 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59687-60380 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVHE01000051.1 Clostridioides difficile CD69 gcdCD69.contig.50, whole genome shotgun sequence

⇒Summary: seq-len = 113001 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 894-1054 bp]: array | spacers
           [Locus range 1116-1605 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVHE01000043.1 Clostridioides difficile CD69 gcdCD69.contig.42, whole genome shotgun sequence

⇒Summary: seq-len = 316362 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 82307-82594 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)