CRISPRone

CRISPRone report for GCA_000449225.2_ASM44922v2

♦ Seq 1: AVHF01000124.1 Clostridioides difficile CD70 gcdCD70.contig.128, whole genome shotgun sequence

⇒Summary: seq-len = 48652 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4051-4408 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVHF01000138.1 Clostridioides difficile CD70 gcdCD70.contig.142, whole genome shotgun sequence

⇒Summary: seq-len = 133376 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90407-92006 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVHF01000060.1 Clostridioides difficile CD70 gcdCD70.contig.64, whole genome shotgun sequence

⇒Summary: seq-len = 84429 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3403-4020 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVHF01000071.1 Clostridioides difficile CD70 gcdCD70.contig.75, whole genome shotgun sequence

⇒Summary: seq-len = 14471 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3100-3857 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVHF01000064.1 Clostridioides difficile CD70 gcdCD70.contig.68, whole genome shotgun sequence

⇒Summary: seq-len = 94951 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 88433-88992 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVHF01000121.1 Clostridioides difficile CD70 gcdCD70.contig.125, whole genome shotgun sequence

⇒Summary: seq-len = 66473 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVHF01000078.1 Clostridioides difficile CD70 gcdCD70.contig.82, whole genome shotgun sequence

⇒Summary: seq-len = 11176 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3733-4883 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVHF01000150.1 Clostridioides difficile CD70 gcdCD70.contig.154, whole genome shotgun sequence

⇒Summary: seq-len = 19542 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8644-8737 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVHF01000096.1 Clostridioides difficile CD70 gcdCD70.contig.100, whole genome shotgun sequence

⇒Summary: seq-len = 3503 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1181-1341 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)