CRISPRone

CRISPRone report for GCA_000449325.2_ASM44932v2

♦ Seq 1: AVHR01000125.1 Clostridioides difficile CD132 gcdCD132.contig.124, whole genome shotgun sequence

⇒Summary: seq-len = 23935 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4134-4557 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVHR01000124.1 Clostridioides difficile CD132 gcdCD132.contig.123, whole genome shotgun sequence

⇒Summary: seq-len = 124575 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVHR01000103.1 Clostridioides difficile CD132 gcdCD132.contig.102, whole genome shotgun sequence

⇒Summary: seq-len = 14488 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5135-5295 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVHR01000084.1 Clostridioides difficile CD132 gcdCD132.contig.83, whole genome shotgun sequence

⇒Summary: seq-len = 4898 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3716-4729 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVHR01000138.1 Clostridioides difficile CD132 gcdCD132.contig.137, whole genome shotgun sequence

⇒Summary: seq-len = 65289 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 22417-23695 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVHR01000145.1 Clostridioides difficile CD132 gcdCD132.contig.144, whole genome shotgun sequence

⇒Summary: seq-len = 22241 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8702-8795 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVHR01000077.1 Clostridioides difficile CD132 gcdCD132.contig.76, whole genome shotgun sequence

⇒Summary: seq-len = 27433 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18191-18746 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVHR01000122.1 Clostridioides difficile CD132 gcdCD132.contig.121, whole genome shotgun sequence

⇒Summary: seq-len = 8735 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4694-5447 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVHR01000067.1 Clostridioides difficile CD132 gcdCD132.contig.66, whole genome shotgun sequence

⇒Summary: seq-len = 61191 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 53900-54913 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVHR01000072.1 Clostridioides difficile CD132 gcdCD132.contig.71, whole genome shotgun sequence

⇒Summary: seq-len = 135392 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 75525-75948 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)