CRISPRone

CRISPRone report for GCA_000449345.2_ASM44934v2

♦ Seq 1: AVHS01000053.1 Clostridioides difficile CD133 gcdCD133.contig.52, whole genome shotgun sequence

⇒Summary: seq-len = 25754 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18836-19197 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVHS01000039.1 Clostridioides difficile CD133 gcdCD133.contig.38, whole genome shotgun sequence

⇒Summary: seq-len = 27844 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 21239-21532 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVHS01000043.1 Clostridioides difficile CD133 gcdCD133.contig.42, whole genome shotgun sequence

⇒Summary: seq-len = 148371 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 88459-88880 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVHS01000048.1 Clostridioides difficile CD133 gcdCD133.contig.47, whole genome shotgun sequence

⇒Summary: seq-len = 12054 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3133-3360 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVHS01000086.1 Clostridioides difficile CD133 gcdCD133.contig.85, whole genome shotgun sequence

⇒Summary: seq-len = 39616 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35510-36260 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVHS01000091.1 Clostridioides difficile CD133 gcdCD133.contig.90, whole genome shotgun sequence

⇒Summary: seq-len = 195414 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 140772-141329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVHS01000079.1 Clostridioides difficile CD133 gcdCD133.contig.78, whole genome shotgun sequence

⇒Summary: seq-len = 40197 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 29986-32987 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVHS01000068.1 Clostridioides difficile CD133 gcdCD133.contig.67, whole genome shotgun sequence

⇒Summary: seq-len = 19700 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2032-2193 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)