CRISPRone

CRISPRone report for GCA_000449605.2_ASM44960v2

♦ Seq 1: AVIE01000865.1 Clostridioides difficile CD196 gcdCD196.contig.898, whole genome shotgun sequence

⇒Summary: seq-len = 10820 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 2-1149 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIE01000857.1 Clostridioides difficile CD196 gcdCD196.contig.890, whole genome shotgun sequence

⇒Summary: seq-len = 1372 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 382-937 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIE01000022.1 Clostridioides difficile CD196 gcdCD196.contig.26, whole genome shotgun sequence

⇒Summary: seq-len = 704 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-557 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIE01000760.1 Clostridioides difficile CD196 gcdCD196.contig.792, whole genome shotgun sequence

⇒Summary: seq-len = 2156 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1361-2116 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIE01000742.1 Clostridioides difficile CD196 gcdCD196.contig.774, whole genome shotgun sequence

⇒Summary: seq-len = 4623 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIE01000315.1 Clostridioides difficile CD196 gcdCD196.contig.336, whole genome shotgun sequence

⇒Summary: seq-len = 3324 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 54-806 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIE01000450.1 Clostridioides difficile CD196 gcdCD196.contig.476, whole genome shotgun sequence

⇒Summary: seq-len = 1433 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 335-1419 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIE01000021.1 Clostridioides difficile CD196 gcdCD196.contig.25, whole genome shotgun sequence

⇒Summary: seq-len = 1143 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 851-1142 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVIE01000904.1 Clostridioides difficile CD196 gcdCD196.contig.939, whole genome shotgun sequence

⇒Summary: seq-len = 9315 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 389-482 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVIE01000700.1 Clostridioides difficile CD196 gcdCD196.contig.731, whole genome shotgun sequence

⇒Summary: seq-len = 4156 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48-474 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVIE01000362.1 Clostridioides difficile CD196 gcdCD196.contig.386, whole genome shotgun sequence

⇒Summary: seq-len = 1457 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 42-530 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVIE01000256.1 Clostridioides difficile CD196 gcdCD196.contig.273, whole genome shotgun sequence

⇒Summary: seq-len = 2244 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 556-1114 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: AVIE01000257.1 Clostridioides difficile CD196 gcdCD196.contig.274, whole genome shotgun sequence

⇒Summary: seq-len = 7038 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4138-4757 bp]: array | spacers
           [Locus range 6460-6885 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: AVIE01000571.1 Clostridioides difficile CD196 gcdCD196.contig.600, whole genome shotgun sequence

⇒Summary: seq-len = 1738 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 718-878 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 15: AVIE01000255.1 Clostridioides difficile CD196 gcdCD196.contig.272, whole genome shotgun sequence

⇒Summary: seq-len = 8371 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1203-2223 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)