CRISPRone

CRISPRone report for GCA_000449625.2_ASM44962v2

♦ Seq 1: AVKG01000067.1 Clostridioides difficile DA00275 gcdDA00275.contig.66, whole genome shotgun sequence

⇒Summary: seq-len = 2459 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 290-847 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVKG01000030.1 Clostridioides difficile DA00275 gcdDA00275.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 17403 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16516-17071 bp]: array | spacers
           [Locus range 17174-17400 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVKG01000034.1 Clostridioides difficile DA00275 gcdDA00275.contig.33, whole genome shotgun sequence

⇒Summary: seq-len = 33093 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2267-3346 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVKG01000072.1 Clostridioides difficile DA00275 gcdDA00275.contig.71, whole genome shotgun sequence

⇒Summary: seq-len = 156169 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90349-91627 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVKG01000062.1 Clostridioides difficile DA00275 gcdDA00275.contig.61, whole genome shotgun sequence

⇒Summary: seq-len = 4980 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 875-1628 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVKG01000073.1 Clostridioides difficile DA00275 gcdDA00275.contig.72, whole genome shotgun sequence

⇒Summary: seq-len = 173420 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 153628-153721 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVKG01000061.1 Clostridioides difficile DA00275 gcdDA00275.contig.60, whole genome shotgun sequence

⇒Summary: seq-len = 99463 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 97687-98030 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVKG01000047.1 Clostridioides difficile DA00275 gcdDA00275.contig.46, whole genome shotgun sequence

⇒Summary: seq-len = 58047 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3988-5071 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVKG01000041.1 Clostridioides difficile DA00275 gcdDA00275.contig.40, whole genome shotgun sequence

⇒Summary: seq-len = 29281 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18258-18683 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVKG01000037.1 Clostridioides difficile DA00275 gcdDA00275.contig.36, whole genome shotgun sequence

⇒Summary: seq-len = 120113 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 109118-109541 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVKG01000064.1 Clostridioides difficile DA00275 gcdDA00275.contig.63, whole genome shotgun sequence

⇒Summary: seq-len = 142517 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVKG01000053.1 Clostridioides difficile DA00275 gcdDA00275.contig.52, whole genome shotgun sequence

⇒Summary: seq-len = 29271 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6169-6329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)