CRISPRone

CRISPRone report for GCA_000449685.2_ASM44968v2

♦ Seq 1: AVIH01000074.1 Clostridioides difficile CD206 gcdCD206.contig.74, whole genome shotgun sequence

⇒Summary: seq-len = 128162 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 77723-79262 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIH01000067.1 Clostridioides difficile CD206 gcdCD206.contig.67, whole genome shotgun sequence

⇒Summary: seq-len = 141511 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIH01000063.1 Clostridioides difficile CD206 gcdCD206.contig.63, whole genome shotgun sequence

⇒Summary: seq-len = 8977 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4691-5705 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIH01000052.1 Clostridioides difficile CD206 gcdCD206.contig.52, whole genome shotgun sequence

⇒Summary: seq-len = 28280 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10618-10777 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIH01000046.1 Clostridioides difficile CD206 gcdCD206.contig.46, whole genome shotgun sequence

⇒Summary: seq-len = 56526 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2296-3512 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIH01000034.1 Clostridioides difficile CD206 gcdCD206.contig.33, whole genome shotgun sequence

⇒Summary: seq-len = 63983 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 28129-28488 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIH01000039.1 Clostridioides difficile CD206 gcdCD206.contig.39, whole genome shotgun sequence

⇒Summary: seq-len = 29137 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17754-18580 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIH01000036.1 Clostridioides difficile CD206 gcdCD206.contig.35, whole genome shotgun sequence

⇒Summary: seq-len = 148245 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 88454-88749 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVIH01000056.1 Clostridioides difficile CD206 gcdCD206.contig.56, whole genome shotgun sequence

⇒Summary: seq-len = 49254 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2803-4209 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVIH01000068.1 Clostridioides difficile CD206 gcdCD206.contig.68, whole genome shotgun sequence

⇒Summary: seq-len = 58800 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4175-4665 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)