CRISPRone

CRISPRone report for GCA_000449705.2_ASM44970v2

♦ Seq 1: AVII01000056.1 Clostridioides difficile CD211 gcdCD211.contig.55, whole genome shotgun sequence

⇒Summary: seq-len = 89469 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59339-59766 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVII01000128.1 Clostridioides difficile CD211 gcdCD211.contig.127, whole genome shotgun sequence

⇒Summary: seq-len = 58518 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3949-4505 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVII01000097.1 Clostridioides difficile CD211 gcdCD211.contig.96, whole genome shotgun sequence

⇒Summary: seq-len = 5097 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2867-3092 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVII01000127.1 Clostridioides difficile CD211 gcdCD211.contig.126, whole genome shotgun sequence

⇒Summary: seq-len = 138683 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVII01000157.1 Clostridioides difficile CD211 gcdCD211.contig.157, whole genome shotgun sequence

⇒Summary: seq-len = 22139 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8686-8779 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVII01000048.1 Clostridioides difficile CD211 gcdCD211.contig.47, whole genome shotgun sequence

⇒Summary: seq-len = 13202 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8358-9175 bp]: array | spacers
           [Locus range 9778-10332 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVII01000066.1 Clostridioides difficile CD211 gcdCD211.contig.65, whole genome shotgun sequence

⇒Summary: seq-len = 14308 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3108-3867 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVII01000122.1 Clostridioides difficile CD211 gcdCD211.contig.121, whole genome shotgun sequence

⇒Summary: seq-len = 61541 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 35495-35721 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVII01000058.1 Clostridioides difficile CD211 gcdCD211.contig.57, whole genome shotgun sequence

⇒Summary: seq-len = 49059 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 42596-43018 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVII01000074.1 Clostridioides difficile CD211 gcdCD211.contig.73, whole genome shotgun sequence

⇒Summary: seq-len = 3801 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1901-3641 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)