CRISPRone

CRISPRone report for GCA_000449745.1_ASM44974v1

♦ Seq 1: AVIK01000099.1 Clostridioides difficile 342 gcd342.contig.102, whole genome shotgun sequence

⇒Summary: seq-len = 170639 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIK01000097.1 Clostridioides difficile 342 gcd342.contig.100, whole genome shotgun sequence

⇒Summary: seq-len = 100759 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 97136-97557 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIK01000107.1 Clostridioides difficile 342 gcd342.contig.110, whole genome shotgun sequence

⇒Summary: seq-len = 81562 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 16331-16879 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIK01000009.1 Clostridioides difficile 342 gcd342.contig.10, whole genome shotgun sequence

⇒Summary: seq-len = 1061 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 770-1062 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIK01000100.1 Clostridioides difficile 342 gcd342.contig.103, whole genome shotgun sequence

⇒Summary: seq-len = 58842 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4183-4678 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIK01000001.1 Clostridioides difficile 342 gcd342.contig.1, whole genome shotgun sequence

⇒Summary: seq-len = 894 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 541-828 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIK01000052.1 Clostridioides difficile 342 gcd342.contig.55, whole genome shotgun sequence

⇒Summary: seq-len = 128718 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59307-59468 bp]: array | spacers
           [Locus range 83377-83929 bp]: array | spacers
           [Locus range 86572-86799 bp]: array | spacers
           [Locus range 89146-89239 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIK01000084.1 Clostridioides difficile 342 gcd342.contig.87, whole genome shotgun sequence

⇒Summary: seq-len = 19676 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2028-2121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVIK01000005.1 Clostridioides difficile 342 gcd342.contig.6, whole genome shotgun sequence

⇒Summary: seq-len = 894 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 67-355 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVIK01000058.1 Clostridioides difficile 342 gcd342.contig.61, whole genome shotgun sequence

⇒Summary: seq-len = 82605 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22184-23137 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVIK01000062.1 Clostridioides difficile 342 gcd342.contig.65, whole genome shotgun sequence

⇒Summary: seq-len = 27068 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17854-18346 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVIK01000003.1 Clostridioides difficile 342 gcd342.contig.3, whole genome shotgun sequence

⇒Summary: seq-len = 634 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-96 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: AVIK01000070.1 Clostridioides difficile 342 gcd342.contig.73, whole genome shotgun sequence

⇒Summary: seq-len = 6991 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5389-6800 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)