CRISPRone

CRISPRone report for GCA_000449785.2_ASM44978v2

♦ Seq 1: AVIM01000065.1 Clostridioides difficile 824 gcd824.contig.64, whole genome shotgun sequence

⇒Summary: seq-len = 28452 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5451-5545 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIM01000085.1 Clostridioides difficile 824 gcd824.contig.84, whole genome shotgun sequence

⇒Summary: seq-len = 14291 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 10559-11118 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIM01000032.1 Clostridioides difficile 824 gcd824.contig.31, whole genome shotgun sequence

⇒Summary: seq-len = 56100 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 46008-46434 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIM01000101.1 Clostridioides difficile 824 gcd824.contig.100, whole genome shotgun sequence

⇒Summary: seq-len = 29202 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8698-8791 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIM01000041.1 Clostridioides difficile 824 gcd824.contig.40, whole genome shotgun sequence

⇒Summary: seq-len = 15614 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9251-9940 bp]: array | spacers
           [Locus range 11574-12325 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIM01000048.1 Clostridioides difficile 824 gcd824.contig.47, whole genome shotgun sequence

⇒Summary: seq-len = 162001 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 131630-132252 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIM01000084.1 Clostridioides difficile 824 gcd824.contig.83, whole genome shotgun sequence

⇒Summary: seq-len = 139030 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIM01000060.1 Clostridioides difficile 824 gcd824.contig.59, whole genome shotgun sequence

⇒Summary: seq-len = 144837 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 112218-113564 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVIM01000053.1 Clostridioides difficile 824 gcd824.contig.52, whole genome shotgun sequence

⇒Summary: seq-len = 113690 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 48756-49845 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVIM01000093.1 Clostridioides difficile 824 gcd824.contig.92, whole genome shotgun sequence

⇒Summary: seq-len = 53048 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 31945-33885 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)