CRISPRone

CRISPRone report for GCA_000449805.2_ASM44980v2

♦ Seq 1: AVIN01000123.1 Clostridioides difficile 840 gcd840.contig.122, whole genome shotgun sequence

⇒Summary: seq-len = 104214 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59733-60090 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIN01000074.1 Clostridioides difficile 840 gcd840.contig.73, whole genome shotgun sequence

⇒Summary: seq-len = 14423 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3052-3809 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIN01000054.1 Clostridioides difficile 840 gcd840.contig.53, whole genome shotgun sequence

⇒Summary: seq-len = 4235 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2661-3546 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIN01000053.1 Clostridioides difficile 840 gcd840.contig.52, whole genome shotgun sequence

⇒Summary: seq-len = 5385 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2842-3134 bp]: array | spacers
           [Locus range 4817-5043 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIN01000084.1 Clostridioides difficile 840 gcd840.contig.83, whole genome shotgun sequence

⇒Summary: seq-len = 9490 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1946-3096 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIN01000065.1 Clostridioides difficile 840 gcd840.contig.64, whole genome shotgun sequence

⇒Summary: seq-len = 66689 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 59192-60341 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIN01000177.1 Clostridioides difficile 840 gcd840.contig.176, whole genome shotgun sequence

⇒Summary: seq-len = 5521 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1455-1950 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIN01000118.1 Clostridioides difficile 840 gcd840.contig.117, whole genome shotgun sequence

⇒Summary: seq-len = 41256 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 37456-38072 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVIN01000136.1 Clostridioides difficile 840 gcd840.contig.135, whole genome shotgun sequence

⇒Summary: seq-len = 53010 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 20782-22381 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVIN01000099.1 Clostridioides difficile 840 gcd840.contig.98, whole genome shotgun sequence

⇒Summary: seq-len = 19702 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2007-2167 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVIN01000134.1 Clostridioides difficile 840 gcd840.contig.133, whole genome shotgun sequence

⇒Summary: seq-len = 3892 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1377-1600 bp]: array | spacers
           [Locus range 3205-3628 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVIN01000069.1 Clostridioides difficile 840 gcd840.contig.68, whole genome shotgun sequence

⇒Summary: seq-len = 68329 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 46969-47528 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: AVIN01000142.1 Clostridioides difficile 840 gcd840.contig.141, whole genome shotgun sequence

⇒Summary: seq-len = 19570 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8694-8787 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: AVIN01000122.1 Clostridioides difficile 840 gcd840.contig.121, whole genome shotgun sequence

⇒Summary: seq-len = 35304 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)