CRISPRone

CRISPRone report for GCA_000449825.2_ASM44982v2

♦ Seq 1: AVIO01000141.1 Clostridioides difficile 842 gcd842.contig.140, whole genome shotgun sequence

⇒Summary: seq-len = 34102 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12186-12279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIO01000080.1 Clostridioides difficile 842 gcd842.contig.79, whole genome shotgun sequence

⇒Summary: seq-len = 36095 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3731-4881 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIO01000095.1 Clostridioides difficile 842 gcd842.contig.94, whole genome shotgun sequence

⇒Summary: seq-len = 21344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1187-1347 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIO01000070.1 Clostridioides difficile 842 gcd842.contig.69, whole genome shotgun sequence

⇒Summary: seq-len = 23606 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17940-18697 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIO01000066.1 Clostridioides difficile 842 gcd842.contig.65, whole genome shotgun sequence

⇒Summary: seq-len = 90074 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44787-45346 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIO01000114.1 Clostridioides difficile 842 gcd842.contig.113, whole genome shotgun sequence

⇒Summary: seq-len = 37504 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 33728-34344 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIO01000121.1 Clostridioides difficile 842 gcd842.contig.120, whole genome shotgun sequence

⇒Summary: seq-len = 3294 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1138-1495 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIO01000131.1 Clostridioides difficile 842 gcd842.contig.130, whole genome shotgun sequence

⇒Summary: seq-len = 111152 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 90426-92025 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVIO01000056.1 Clostridioides difficile 842 gcd842.contig.55, whole genome shotgun sequence

⇒Summary: seq-len = 10694 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3082-3506 bp]: array | spacers
           [Locus range 5110-5334 bp]: array | spacers
           [Locus range 7127-8013 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVIO01000063.1 Clostridioides difficile 842 gcd842.contig.62, whole genome shotgun sequence

⇒Summary: seq-len = 131725 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 100880-102029 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVIO01000118.1 Clostridioides difficile 842 gcd842.contig.117, whole genome shotgun sequence

⇒Summary: seq-len = 35387 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVIO01000006.1 Clostridioides difficile 842 gcd842.contig.5, whole genome shotgun sequence

⇒Summary: seq-len = 4883 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 817-1312 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: AVIO01000133.1 Clostridioides difficile 842 gcd842.contig.132, whole genome shotgun sequence

⇒Summary: seq-len = 3667 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1206-1431 bp]: array | spacers
           [Locus range 3115-3406 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)