CRISPRone

CRISPRone report for GCA_000449905.2_ASM44990v2

♦ Seq 1: AVIS01000091.1 Clostridioides difficile DA00044 gcdDA00044.contig.92, whole genome shotgun sequence

⇒Summary: seq-len = 7984 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5782-5942 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIS01000043.1 Clostridioides difficile DA00044 gcdDA00044.contig.44, whole genome shotgun sequence

⇒Summary: seq-len = 22176 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17950-18505 bp]: array | spacers
           [Locus range 18608-18834 bp]: array | spacers
           [Locus range 20450-20793 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIS01000130.1 Clostridioides difficile DA00044 gcdDA00044.contig.131, whole genome shotgun sequence

⇒Summary: seq-len = 32560 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8670-8763 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIS01000126.1 Clostridioides difficile DA00044 gcdDA00044.contig.127, whole genome shotgun sequence

⇒Summary: seq-len = 88771 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 68322-69600 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIS01000116.1 Clostridioides difficile DA00044 gcdDA00044.contig.117, whole genome shotgun sequence

⇒Summary: seq-len = 105684 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIS01000117.1 Clostridioides difficile DA00044 gcdDA00044.contig.118, whole genome shotgun sequence

⇒Summary: seq-len = 64182 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4158-4715 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIS01000063.1 Clostridioides difficile DA00044 gcdDA00044.contig.64, whole genome shotgun sequence

⇒Summary: seq-len = 16974 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6101-6526 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIS01000073.1 Clostridioides difficile DA00044 gcdDA00044.contig.74, whole genome shotgun sequence

⇒Summary: seq-len = 9499 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1935-3018 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVIS01000111.1 Clostridioides difficile DA00044 gcdDA00044.contig.112, whole genome shotgun sequence

⇒Summary: seq-len = 4551 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 361-1114 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVIS01000053.1 Clostridioides difficile DA00044 gcdDA00044.contig.54, whole genome shotgun sequence

⇒Summary: seq-len = 32705 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1849-2928 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVIS01000057.1 Clostridioides difficile DA00044 gcdDA00044.contig.58, whole genome shotgun sequence

⇒Summary: seq-len = 176684 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124571-124994 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)