CRISPRone

CRISPRone report for GCA_000449925.2_ASM44992v2

♦ Seq 1: AVIT01000057.1 Clostridioides difficile DA00062 gcdDA00062.contig.56, whole genome shotgun sequence

⇒Summary: seq-len = 131031 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124412-124971 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIT01000111.1 Clostridioides difficile DA00062 gcdDA00062.contig.110, whole genome shotgun sequence

⇒Summary: seq-len = 8057 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4462-5078 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIT01000125.1 Clostridioides difficile DA00062 gcdDA00062.contig.125, whole genome shotgun sequence

⇒Summary: seq-len = 172253 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 151536-153135 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIT01000063.1 Clostridioides difficile DA00062 gcdDA00062.contig.62, whole genome shotgun sequence

⇒Summary: seq-len = 14503 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3132-3889 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIT01000131.1 Clostridioides difficile DA00062 gcdDA00062.contig.131, whole genome shotgun sequence

⇒Summary: seq-len = 19573 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8690-8783 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIT01000091.1 Clostridioides difficile DA00062 gcdDA00062.contig.90, whole genome shotgun sequence

⇒Summary: seq-len = 14280 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1184-1344 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIT01000069.1 Clostridioides difficile DA00062 gcdDA00062.contig.68, whole genome shotgun sequence

⇒Summary: seq-len = 5097 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3805-4955 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIT01000115.1 Clostridioides difficile DA00062 gcdDA00062.contig.115, whole genome shotgun sequence

⇒Summary: seq-len = 66534 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVIT01000117.1 Clostridioides difficile DA00062 gcdDA00062.contig.117, whole genome shotgun sequence

⇒Summary: seq-len = 48591 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4156-4513 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)