CRISPRone

CRISPRone report for GCA_000449985.2_ASM44998v2

♦ Seq 1: AVIW01000076.1 Clostridioides difficile DA00126 gcdDA00126.contig.89, whole genome shotgun sequence

⇒Summary: seq-len = 101616 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 97722-98477 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVIW01000065.1 Clostridioides difficile DA00126 gcdDA00126.contig.78, whole genome shotgun sequence

⇒Summary: seq-len = 12070 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1932-2820 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVIW01000059.1 Clostridioides difficile DA00126 gcdDA00126.contig.72, whole genome shotgun sequence

⇒Summary: seq-len = 217523 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 125112-126326 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVIW01000077.1 Clostridioides difficile DA00126 gcdDA00126.contig.90, whole genome shotgun sequence

⇒Summary: seq-len = 290756 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 244189-245145 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVIW01000072.1 Clostridioides difficile DA00126 gcdDA00126.contig.85, whole genome shotgun sequence

⇒Summary: seq-len = 25099 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2019-2180 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVIW01000061.1 Clostridioides difficile DA00126 gcdDA00126.contig.74, whole genome shotgun sequence

⇒Summary: seq-len = 41502 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16573-17067 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVIW01000081.1 Clostridioides difficile DA00126 gcdDA00126.contig.95, whole genome shotgun sequence

⇒Summary: seq-len = 193275 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 126861-128600 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVIW01000062.1 Clostridioides difficile DA00126 gcdDA00126.contig.75, whole genome shotgun sequence

⇒Summary: seq-len = 203176 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 66227-66654 bp]: array | spacers
           [Locus range 67257-67681 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)