CRISPRone

CRISPRone report for GCA_000450085.2_ASM45008v2

♦ Seq 1: AVJB01000079.1 Clostridioides difficile DA00134 gcdDA00134.contig.78, whole genome shotgun sequence

⇒Summary: seq-len = 5795 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1242-2061 bp]: array | spacers
           [Locus range 2664-2889 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVJB01000048.1 Clostridioides difficile DA00134 gcdDA00134.contig.47, whole genome shotgun sequence

⇒Summary: seq-len = 7104 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3053-3278 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVJB01000073.1 Clostridioides difficile DA00134 gcdDA00134.contig.72, whole genome shotgun sequence

⇒Summary: seq-len = 5171 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1153-1905 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVJB01000062.1 Clostridioides difficile DA00134 gcdDA00134.contig.61, whole genome shotgun sequence

⇒Summary: seq-len = 53144 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23423-25095 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVJB01000075.1 Clostridioides difficile DA00134 gcdDA00134.contig.74, whole genome shotgun sequence

⇒Summary: seq-len = 424715 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 217053-217277 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVJB01000056.1 Clostridioides difficile DA00134 gcdDA00134.contig.55, whole genome shotgun sequence

⇒Summary: seq-len = 185172 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 120967-121394 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVJB01000057.1 Clostridioides difficile DA00134 gcdDA00134.contig.56, whole genome shotgun sequence

⇒Summary: seq-len = 28873 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17910-18402 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVJB01000069.1 Clostridioides difficile DA00134 gcdDA00134.contig.68, whole genome shotgun sequence

⇒Summary: seq-len = 50228 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 14023-15164 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)