CRISPRone

CRISPRone report for GCA_000450145.2_ASM45014v2

♦ Seq 1: AVJE01000050.1 Clostridioides difficile DA00145 gcdDA00145.contig.49, whole genome shotgun sequence

⇒Summary: seq-len = 16934 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7742-8308 bp]: array | spacers
           [Locus range 9926-10151 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVJE01000083.1 Clostridioides difficile DA00145 gcdDA00145.contig.82, whole genome shotgun sequence

⇒Summary: seq-len = 19207 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5471-5699 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVJE01000098.1 Clostridioides difficile DA00145 gcdDA00145.contig.97, whole genome shotgun sequence

⇒Summary: seq-len = 67250 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVJE01000064.1 Clostridioides difficile DA00145 gcdDA00145.contig.63, whole genome shotgun sequence

⇒Summary: seq-len = 34533 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 23770-24064 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVJE01000062.1 Clostridioides difficile DA00145 gcdDA00145.contig.61, whole genome shotgun sequence

⇒Summary: seq-len = 62783 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 636-796 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVJE01000087.1 Clostridioides difficile DA00145 gcdDA00145.contig.86, whole genome shotgun sequence

⇒Summary: seq-len = 37991 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2827-3186 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVJE01000070.1 Clostridioides difficile DA00145 gcdDA00145.contig.69, whole genome shotgun sequence

⇒Summary: seq-len = 26285 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18498-19703 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)