CRISPRone

CRISPRone report for GCA_000450285.2_ASM45028v2

♦ Seq 1: AVJL01000039.1 Clostridioides difficile DA00183 gcdDA00183.contig.39, whole genome shotgun sequence

⇒Summary: seq-len = 2744 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 119-676 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVJL01000084.1 Clostridioides difficile DA00183 gcdDA00183.contig.84, whole genome shotgun sequence

⇒Summary: seq-len = 3252 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 879-1632 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVJL01000040.1 Clostridioides difficile DA00183 gcdDA00183.contig.40, whole genome shotgun sequence

⇒Summary: seq-len = 19024 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 471-698 bp]: array | spacers
           [Locus range 800-1356 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVJL01000087.1 Clostridioides difficile DA00183 gcdDA00183.contig.87, whole genome shotgun sequence

⇒Summary: seq-len = 71202 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVJL01000083.1 Clostridioides difficile DA00183 gcdDA00183.contig.83, whole genome shotgun sequence

⇒Summary: seq-len = 6472 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4712-5055 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVJL01000060.1 Clostridioides difficile DA00183 gcdDA00183.contig.60, whole genome shotgun sequence

⇒Summary: seq-len = 36270 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3969-5052 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVJL01000100.1 Clostridioides difficile DA00183 gcdDA00183.contig.100, whole genome shotgun sequence

⇒Summary: seq-len = 161503 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 141734-141827 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVJL01000098.1 Clostridioides difficile DA00183 gcdDA00183.contig.98, whole genome shotgun sequence

⇒Summary: seq-len = 78848 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 13001-14279 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVJL01000046.1 Clostridioides difficile DA00183 gcdDA00183.contig.46, whole genome shotgun sequence

⇒Summary: seq-len = 30731 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2236-3315 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVJL01000054.1 Clostridioides difficile DA00183 gcdDA00183.contig.54, whole genome shotgun sequence

⇒Summary: seq-len = 29236 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18234-18659 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVJL01000050.1 Clostridioides difficile DA00183 gcdDA00183.contig.50, whole genome shotgun sequence

⇒Summary: seq-len = 145297 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124077-124500 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVJL01000071.1 Clostridioides difficile DA00183 gcdDA00183.contig.71, whole genome shotgun sequence

⇒Summary: seq-len = 23656 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 613-773 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)