CRISPRone

CRISPRone report for GCA_000450705.2_ASM45070v2

♦ Seq 1: AVKL01000102.1 Clostridioides difficile DA00313 gcdDA00313.contig.102, whole genome shotgun sequence

⇒Summary: seq-len = 171214 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 160346-160439 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVKL01000100.1 Clostridioides difficile DA00313 gcdDA00313.contig.100, whole genome shotgun sequence

⇒Summary: seq-len = 82149 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 16252-17785 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVKL01000066.1 Clostridioides difficile DA00313 gcdDA00313.contig.66, whole genome shotgun sequence

⇒Summary: seq-len = 18840 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1167-1327 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVKL01000085.1 Clostridioides difficile DA00313 gcdDA00313.contig.85, whole genome shotgun sequence

⇒Summary: seq-len = 48815 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4185-4477 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVKL01000046.1 Clostridioides difficile DA00313 gcdDA00313.contig.45, whole genome shotgun sequence

⇒Summary: seq-len = 148399 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 88442-89001 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVKL01000083.1 Clostridioides difficile DA00313 gcdDA00313.contig.83, whole genome shotgun sequence

⇒Summary: seq-len = 109326 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVKL01000059.1 Clostridioides difficile DA00313 gcdDA00313.contig.59, whole genome shotgun sequence

⇒Summary: seq-len = 44289 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3967-5117 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVKL01000054.1 Clostridioides difficile DA00313 gcdDA00313.contig.54, whole genome shotgun sequence

⇒Summary: seq-len = 74798 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 13400-13824 bp]: array | spacers
           [Locus range 15428-15652 bp]: array | spacers
           [Locus range 17445-18265 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVKL01000081.1 Clostridioides difficile DA00313 gcdDA00313.contig.81, whole genome shotgun sequence

⇒Summary: seq-len = 6912 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2964-3580 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVKL01000050.1 Clostridioides difficile DA00313 gcdDA00313.contig.49, whole genome shotgun sequence

⇒Summary: seq-len = 14411 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3155-3912 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)