CRISPRone

CRISPRone report for GCA_000450845.2_ASM45084v2

♦ Seq 1: AVKS01000089.1 Clostridioides difficile Y21 gcdY21.contig.88, whole genome shotgun sequence

⇒Summary: seq-len = 3225 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1908-3058 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVKS01000071.1 Clostridioides difficile Y21 gcdY21.contig.70, whole genome shotgun sequence

⇒Summary: seq-len = 57529 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 50870-51429 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVKS01000137.1 Clostridioides difficile Y21 gcdY21.contig.136, whole genome shotgun sequence

⇒Summary: seq-len = 44431 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 40491-41107 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVKS01000053.1 Clostridioides difficile Y21 gcdY21.contig.52, whole genome shotgun sequence

⇒Summary: seq-len = 9170 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6639-6931 bp]: array | spacers
           [Locus range 8614-8840 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVKS01000222.1 Clostridioides difficile Y21 gcdY21.contig.221, whole genome shotgun sequence

⇒Summary: seq-len = 6739 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 66-490 bp]: array | spacers
           [Locus range 2094-2318 bp]: array | spacers
           [Locus range 4158-4653 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVKS01000113.1 Clostridioides difficile Y21 gcdY21.contig.112, whole genome shotgun sequence

⇒Summary: seq-len = 14223 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1159-1319 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVKS01000090.1 Clostridioides difficile Y21 gcdY21.contig.89, whole genome shotgun sequence

⇒Summary: seq-len = 2327 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 398-1284 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVKS01000146.1 Clostridioides difficile Y21 gcdY21.contig.145, whole genome shotgun sequence

⇒Summary: seq-len = 48831 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4142-4499 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVKS01000144.1 Clostridioides difficile Y21 gcdY21.contig.143, whole genome shotgun sequence

⇒Summary: seq-len = 27192 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVKS01000168.1 Clostridioides difficile Y21 gcdY21.contig.167, whole genome shotgun sequence

⇒Summary: seq-len = 28030 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 7294-8893 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVKS01000078.1 Clostridioides difficile Y21 gcdY21.contig.77, whole genome shotgun sequence

⇒Summary: seq-len = 12581 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3085-3842 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVKS01000174.1 Clostridioides difficile Y21 gcdY21.contig.173, whole genome shotgun sequence

⇒Summary: seq-len = 19500 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8640-8733 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)