CRISPRone

CRISPRone report for GCA_000450905.2_ASM45090v2

♦ Seq 1: AVLK01000136.1 Clostridioides difficile Y401 gcdY401.contig.135, whole genome shotgun sequence

⇒Summary: seq-len = 8366 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4347-4962 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVLK01000106.1 Clostridioides difficile Y401 gcdY401.contig.105, whole genome shotgun sequence

⇒Summary: seq-len = 2707 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 463-623 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVLK01000080.1 Clostridioides difficile Y401 gcdY401.contig.79, whole genome shotgun sequence

⇒Summary: seq-len = 5621 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4043-5458 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVLK01000065.1 Clostridioides difficile Y401 gcdY401.contig.64, whole genome shotgun sequence

⇒Summary: seq-len = 41260 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 34549-35306 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVLK01000142.1 Clostridioides difficile Y401 gcdY401.contig.141, whole genome shotgun sequence

⇒Summary: seq-len = 35255 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVLK01000073.1 Clostridioides difficile Y401 gcdY401.contig.72, whole genome shotgun sequence

⇒Summary: seq-len = 14933 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3072-4423 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVLK01000161.1 Clostridioides difficile Y401 gcdY401.contig.160, whole genome shotgun sequence

⇒Summary: seq-len = 52852 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 41710-41932 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVLK01000169.1 Clostridioides difficile Y401 gcdY401.contig.168, whole genome shotgun sequence

⇒Summary: seq-len = 22101 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8693-8786 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVLK01000146.1 Clostridioides difficile Y401 gcdY401.contig.145, whole genome shotgun sequence

⇒Summary: seq-len = 44989 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 155-579 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVLK01000163.1 Clostridioides difficile Y401 gcdY401.contig.162, whole genome shotgun sequence

⇒Summary: seq-len = 22894 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 1905-3769 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)