CRISPRone

CRISPRone report for GCA_000451085.2_ASM45108v2

♦ Seq 1: AVMA01000030.1 Clostridioides difficile P24 gcdP24.contig.30, whole genome shotgun sequence

⇒Summary: seq-len = 64544 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 42-665 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVMA01000031.1 Clostridioides difficile P24 gcdP24.contig.31, whole genome shotgun sequence

⇒Summary: seq-len = 28716 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17766-18127 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVMA01000048.1 Clostridioides difficile P24 gcdP24.contig.48, whole genome shotgun sequence

⇒Summary: seq-len = 31683 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7245-7539 bp]: array | spacers
           [Locus range 9337-9430 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVMA01000045.1 Clostridioides difficile P24 gcdP24.contig.45, whole genome shotgun sequence

⇒Summary: seq-len = 397507 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 151781-152470 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVMA01000028.1 Clostridioides difficile P24 gcdP24.contig.28, whole genome shotgun sequence

⇒Summary: seq-len = 259532 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 137385-138540 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVMA01000036.1 Clostridioides difficile P24 gcdP24.contig.36, whole genome shotgun sequence

⇒Summary: seq-len = 41011 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 39944-41031 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVMA01000046.1 Clostridioides difficile P24 gcdP24.contig.46, whole genome shotgun sequence

⇒Summary: seq-len = 518328 bp; # of CRISPR array = 2; # of cas gene = 14  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 248281-250740 bp]: array | spacers
           [Locus range 459622-460437 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVMA01000034.1 Clostridioides difficile P24 gcdP24.contig.34, whole genome shotgun sequence

⇒Summary: seq-len = 90382 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12888-13113 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVMA01000042.1 Clostridioides difficile P24 gcdP24.contig.42, whole genome shotgun sequence

⇒Summary: seq-len = 9447 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4692-6243 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVMA01000037.1 Clostridioides difficile P24 gcdP24.contig.37, whole genome shotgun sequence

⇒Summary: seq-len = 58701 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1-1619 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)