CRISPRone

CRISPRone report for GCA_000451185.2_ASM45118v2

♦ Seq 1: AVLC01000106.1 Clostridioides difficile Y266 gcdY266.contig.105, whole genome shotgun sequence

⇒Summary: seq-len = 24216 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1163-1323 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVLC01000156.1 Clostridioides difficile Y266 gcdY266.contig.155, whole genome shotgun sequence

⇒Summary: seq-len = 36777 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 16345-17687 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVLC01000067.1 Clostridioides difficile Y266 gcdY266.contig.66, whole genome shotgun sequence

⇒Summary: seq-len = 29479 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 22693-23452 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVLC01000131.1 Clostridioides difficile Y266 gcdY266.contig.130, whole genome shotgun sequence

⇒Summary: seq-len = 8815 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5042-5863 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVLC01000137.1 Clostridioides difficile Y266 gcdY266.contig.136, whole genome shotgun sequence

⇒Summary: seq-len = 105688 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVLC01000076.1 Clostridioides difficile Y266 gcdY266.contig.75, whole genome shotgun sequence

⇒Summary: seq-len = 12396 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3166-3722 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVLC01000084.1 Clostridioides difficile Y266 gcdY266.contig.83, whole genome shotgun sequence

⇒Summary: seq-len = 5198 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3968-5051 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVLC01000164.1 Clostridioides difficile Y266 gcdY266.contig.163, whole genome shotgun sequence

⇒Summary: seq-len = 17685 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 8648-8741 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVLC01000062.1 Clostridioides difficile Y266 gcdY266.contig.61, whole genome shotgun sequence

⇒Summary: seq-len = 89547 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61274-62158 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVLC01000052.1 Clostridioides difficile Y266 gcdY266.contig.51, whole genome shotgun sequence

⇒Summary: seq-len = 3001 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1822-2380 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)