CRISPRone

CRISPRone report for GCA_000451325.2_ASM45132v2

♦ Seq 1: AVHO01000227.1 Clostridioides difficile CD127 gcdCD127.contig.237, whole genome shotgun sequence

⇒Summary: seq-len = 4361 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 565-989 bp]: array | spacers
           [Locus range 2593-2817 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVHO01000873.1 Clostridioides difficile CD127 gcdCD127.contig.892, whole genome shotgun sequence

⇒Summary: seq-len = 11292 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 431-524 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVHO01000821.1 Clostridioides difficile CD127 gcdCD127.contig.838, whole genome shotgun sequence

⇒Summary: seq-len = 2214 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 774-2177 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVHO01000718.1 Clostridioides difficile CD127 gcdCD127.contig.735, whole genome shotgun sequence

⇒Summary: seq-len = 14135 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3868-4225 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVHO01000527.1 Clostridioides difficile CD127 gcdCD127.contig.543, whole genome shotgun sequence

⇒Summary: seq-len = 1661 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 686-846 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVHO01000822.1 Clostridioides difficile CD127 gcdCD127.contig.839, whole genome shotgun sequence

⇒Summary: seq-len = 6883 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 21-509 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVHO01000655.1 Clostridioides difficile CD127 gcdCD127.contig.672, whole genome shotgun sequence

⇒Summary: seq-len = 4865 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2506-3057 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVHO01000823.1 Clostridioides difficile CD127 gcdCD127.contig.840, whole genome shotgun sequence

⇒Summary: seq-len = 1826 bp; # of CRISPR array = 0; # of cas gene = 2  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVHO01000699.1 Clostridioides difficile CD127 gcdCD127.contig.716, whole genome shotgun sequence

⇒Summary: seq-len = 4338 bp; # of CRISPR array = 0; # of cas gene = 3  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVHO01000420.1 Clostridioides difficile CD127 gcdCD127.contig.434, whole genome shotgun sequence

⇒Summary: seq-len = 1641 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 365-1515 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVHO01000330.1 Clostridioides difficile CD127 gcdCD127.contig.341, whole genome shotgun sequence

⇒Summary: seq-len = 1792 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1477-1767 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVHO01000228.1 Clostridioides difficile CD127 gcdCD127.contig.238, whole genome shotgun sequence

⇒Summary: seq-len = 15830 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 261-1147 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: AVHO01000365.1 Clostridioides difficile CD127 gcdCD127.contig.377, whole genome shotgun sequence

⇒Summary: seq-len = 1259 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 393-1150 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 14: AVHO01000331.1 Clostridioides difficile CD127 gcdCD127.contig.342, whole genome shotgun sequence

⇒Summary: seq-len = 2893 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 41-601 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)