CRISPRone

CRISPRone report for GCA_000451345.1_ASM45134v1

♦ Seq 1: AVKH01000446.1 Clostridioides difficile DA00305 gcdDA00305.contig.466, whole genome shotgun sequence

⇒Summary: seq-len = 26014 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVKH01000215.1 Clostridioides difficile DA00305 gcdDA00305.contig.226, whole genome shotgun sequence

⇒Summary: seq-len = 5670 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 336-828 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVKH01000190.1 Clostridioides difficile DA00305 gcdDA00305.contig.200, whole genome shotgun sequence

⇒Summary: seq-len = 1993 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2-624 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVKH01000123.1 Clostridioides difficile DA00305 gcdDA00305.contig.131, whole genome shotgun sequence

⇒Summary: seq-len = 8840 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2267-2560 bp]: array | spacers
           [Locus range 5203-5496 bp]: array | spacers
           [Locus range 7843-7936 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVKH01000527.1 Clostridioides difficile DA00305 gcdDA00305.contig.548, whole genome shotgun sequence

⇒Summary: seq-len = 11158 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 900-1448 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVKH01000156.1 Clostridioides difficile DA00305 gcdDA00305.contig.165, whole genome shotgun sequence

⇒Summary: seq-len = 1328 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4-1220 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVKH01000155.1 Clostridioides difficile DA00305 gcdDA00305.contig.164, whole genome shotgun sequence

⇒Summary: seq-len = 2414 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1861-2416 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVKH01000417.1 Clostridioides difficile DA00305 gcdDA00305.contig.437, whole genome shotgun sequence

⇒Summary: seq-len = 6337 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2718-3139 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVKH01000327.1 Clostridioides difficile DA00305 gcdDA00305.contig.344, whole genome shotgun sequence

⇒Summary: seq-len = 3602 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2205-2298 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVKH01000154.1 Clostridioides difficile DA00305 gcdDA00305.contig.163, whole genome shotgun sequence

⇒Summary: seq-len = 3424 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2089-2250 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVKH01000459.1 Clostridioides difficile DA00305 gcdDA00305.contig.479, whole genome shotgun sequence

⇒Summary: seq-len = 11897 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1301-1796 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVKH01000246.1 Clostridioides difficile DA00305 gcdDA00305.contig.258, whole genome shotgun sequence

⇒Summary: seq-len = 2424 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1939-2426 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 13: AVKH01000639.1 Clostridioides difficile DA00305 gcdDA00305.contig.664, whole genome shotgun sequence

⇒Summary: seq-len = 950 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 856-950 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)