CRISPRone

CRISPRone report for GCA_000451425.2_ASM45142v2

♦ Seq 1: AVLA01000024.1 Clostridioides difficile Y231 gcdY231.contig.23, whole genome shotgun sequence

⇒Summary: seq-len = 62043 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3984-5002 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVLA01000031.1 Clostridioides difficile Y231 gcdY231.contig.30, whole genome shotgun sequence

⇒Summary: seq-len = 4011 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 286-1039 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVLA01000035.1 Clostridioides difficile Y231 gcdY231.contig.34, whole genome shotgun sequence

⇒Summary: seq-len = 515918 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 252983-254261 bp]: array | spacers
           [Locus range 472593-472686 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVLA01000013.1 Clostridioides difficile Y231 gcdY231.contig.12, whole genome shotgun sequence

⇒Summary: seq-len = 2478 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1794-2352 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVLA01000017.1 Clostridioides difficile Y231 gcdY231.contig.16, whole genome shotgun sequence

⇒Summary: seq-len = 273903 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 186391-187470 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVLA01000032.1 Clostridioides difficile Y231 gcdY231.contig.31, whole genome shotgun sequence

⇒Summary: seq-len = 240184 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVLA01000018.1 Clostridioides difficile Y231 gcdY231.contig.17, whole genome shotgun sequence

⇒Summary: seq-len = 132852 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124484-124907 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVLA01000014.1 Clostridioides difficile Y231 gcdY231.contig.13, whole genome shotgun sequence

⇒Summary: seq-len = 20367 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1011-1355 bp]: array | spacers
           [Locus range 2970-3197 bp]: array | spacers
           [Locus range 3299-3855 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVLA01000028.1 Clostridioides difficile Y231 gcdY231.contig.27, whole genome shotgun sequence

⇒Summary: seq-len = 104207 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1102-1262 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVLA01000020.1 Clostridioides difficile Y231 gcdY231.contig.19, whole genome shotgun sequence

⇒Summary: seq-len = 28850 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18249-18674 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)