CRISPRone

CRISPRone report for GCA_000451485.2_ASM45148v2

♦ Seq 1: AVLE01000109.1 Clostridioides difficile Y307 gcdY307.contig.120, whole genome shotgun sequence

⇒Summary: seq-len = 50846 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 46078-46371 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVLE01000220.1 Clostridioides difficile Y307 gcdY307.contig.234, whole genome shotgun sequence

⇒Summary: seq-len = 15499 bp; # of CRISPR array = 1; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 5449-8450 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVLE01000133.1 Clostridioides difficile Y307 gcdY307.contig.144, whole genome shotgun sequence

⇒Summary: seq-len = 11950 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3022-3249 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVLE01000265.1 Clostridioides difficile Y307 gcdY307.contig.279, whole genome shotgun sequence

⇒Summary: seq-len = 30044 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3937-4494 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVLE01000123.1 Clostridioides difficile Y307 gcdY307.contig.134, whole genome shotgun sequence

⇒Summary: seq-len = 31121 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24787-25208 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVLE01000150.1 Clostridioides difficile Y307 gcdY307.contig.163, whole genome shotgun sequence

⇒Summary: seq-len = 2519 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1985-2346 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVLE01000193.1 Clostridioides difficile Y307 gcdY307.contig.207, whole genome shotgun sequence

⇒Summary: seq-len = 4262 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1980-2141 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVLE01000242.1 Clostridioides difficile Y307 gcdY307.contig.256, whole genome shotgun sequence

⇒Summary: seq-len = 28385 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 24598-25348 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVLE01000092.1 Clostridioides difficile Y307 gcdY307.contig.102, whole genome shotgun sequence

⇒Summary: seq-len = 13453 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 626-917 bp]: array | spacers
           [Locus range 3220-3977 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVLE01000260.1 Clostridioides difficile Y307 gcdY307.contig.274, whole genome shotgun sequence

⇒Summary: seq-len = 23648 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)