CRISPRone

CRISPRone report for GCA_000451565.2_ASM45156v2

♦ Seq 1: AVLN01000147.1 Clostridioides difficile P3 gcdP3.contig.179, whole genome shotgun sequence

⇒Summary: seq-len = 34125 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12195-12288 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVLN01000076.1 Clostridioides difficile P3 gcdP3.contig.107, whole genome shotgun sequence

⇒Summary: seq-len = 132923 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124400-124959 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVLN01000106.1 Clostridioides difficile P3 gcdP3.contig.137, whole genome shotgun sequence

⇒Summary: seq-len = 23112 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5452-5612 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVLN01000073.1 Clostridioides difficile P3 gcdP3.contig.104, whole genome shotgun sequence

⇒Summary: seq-len = 14467 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 7000-8149 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVLN01000065.1 Clostridioides difficile P3 gcdP3.contig.96, whole genome shotgun sequence

⇒Summary: seq-len = 30121 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 29-321 bp]: array | spacers
           [Locus range 2004-2230 bp]: array | spacers
           [Locus range 4092-4587 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVLN01000090.1 Clostridioides difficile P3 gcdP3.contig.121, whole genome shotgun sequence

⇒Summary: seq-len = 3332 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1956-3106 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVLN01000127.1 Clostridioides difficile P3 gcdP3.contig.158, whole genome shotgun sequence

⇒Summary: seq-len = 161903 bp; # of CRISPR array = 0; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVLN01000069.1 Clostridioides difficile P3 gcdP3.contig.100, whole genome shotgun sequence

⇒Summary: seq-len = 83197 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 82876-83168 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVLN01000125.1 Clostridioides difficile P3 gcdP3.contig.156, whole genome shotgun sequence

⇒Summary: seq-len = 8214 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4517-5133 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVLN01000130.1 Clostridioides difficile P3 gcdP3.contig.161, whole genome shotgun sequence

⇒Summary: seq-len = 48692 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4123-4480 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVLN01000081.1 Clostridioides difficile P3 gcdP3.contig.112, whole genome shotgun sequence

⇒Summary: seq-len = 14448 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3163-3920 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 12: AVLN01000142.1 Clostridioides difficile P3 gcdP3.contig.174, whole genome shotgun sequence

⇒Summary: seq-len = 43261 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 22562-24161 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)