CRISPRone

CRISPRone report for GCA_000451685.2_ASM45168v2

♦ Seq 1: AVLV01000025.1 Clostridioides difficile P15 gcdP15.contig.24, whole genome shotgun sequence

⇒Summary: seq-len = 268132 bp; # of CRISPR array = 2; # of cas gene = 8  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 64603-67604 bp]: array | spacers
           [Locus range 264045-264795 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVLV01000021.1 Clostridioides difficile P15 gcdP15.contig.20, whole genome shotgun sequence

⇒Summary: seq-len = 240026 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 39980-40341 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVLV01000028.1 Clostridioides difficile P15 gcdP15.contig.27, whole genome shotgun sequence

⇒Summary: seq-len = 248221 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 618-1175 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVLV01000027.1 Clostridioides difficile P15 gcdP15.contig.26, whole genome shotgun sequence

⇒Summary: seq-len = 234752 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVLV01000023.1 Clostridioides difficile P15 gcdP15.contig.22, whole genome shotgun sequence

⇒Summary: seq-len = 93860 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1507-1668 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVLV01000018.1 Clostridioides difficile P15 gcdP15.contig.17, whole genome shotgun sequence

⇒Summary: seq-len = 471623 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 379952-380373 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVLV01000019.1 Clostridioides difficile P15 gcdP15.contig.18, whole genome shotgun sequence

⇒Summary: seq-len = 60467 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 47068-47361 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVLV01000020.1 Clostridioides difficile P15 gcdP15.contig.19, whole genome shotgun sequence

⇒Summary: seq-len = 155694 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18221-18448 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)