CRISPRone

CRISPRone report for GCA_000451705.1_ASM45170v1

♦ Seq 1: AVLW01000021.1 Clostridioides difficile P19 gcdP19.contig.20, whole genome shotgun sequence

⇒Summary: seq-len = 3214 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2551-3109 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVLW01000028.1 Clostridioides difficile P19 gcdP19.contig.27, whole genome shotgun sequence

⇒Summary: seq-len = 68752 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4723-5146 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVLW01000033.1 Clostridioides difficile P19 gcdP19.contig.32, whole genome shotgun sequence

⇒Summary: seq-len = 61609 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 3999-4624 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVLW01000044.1 Clostridioides difficile P19 gcdP19.contig.43, whole genome shotgun sequence

⇒Summary: seq-len = 515952 bp; # of CRISPR array = 2; # of cas gene = 10  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 253181-254327 bp]: array | spacers
           [Locus range 472644-472737 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVLW01000036.1 Clostridioides difficile P19 gcdP19.contig.35, whole genome shotgun sequence

⇒Summary: seq-len = 55984 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 834-994 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVLW01000039.1 Clostridioides difficile P19 gcdP19.contig.38, whole genome shotgun sequence

⇒Summary: seq-len = 259171 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 257223-257976 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVLW01000026.1 Clostridioides difficile P19 gcdP19.contig.25, whole genome shotgun sequence

⇒Summary: seq-len = 228820 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 138725-139605 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVLW01000022.1 Clostridioides difficile P19 gcdP19.contig.21, whole genome shotgun sequence

⇒Summary: seq-len = 9967 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1331-1426 bp]: array | spacers
           [Locus range 4756-5111 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVLW01000030.1 Clostridioides difficile P19 gcdP19.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 81396 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18259-18814 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVLW01000041.1 Clostridioides difficile P19 gcdP19.contig.40, whole genome shotgun sequence

⇒Summary: seq-len = 240886 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)