CRISPRone

CRISPRone report for GCA_000451765.1_ASM45176v1

♦ Seq 1: AVME01000031.1 Clostridioides difficile P30 gcdP30.contig.30, whole genome shotgun sequence

⇒Summary: seq-len = 98604 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6145-6370 bp]: array | spacers
           [Locus range 52039-53448 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVME01000030.1 Clostridioides difficile P30 gcdP30.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 314973 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12-1022 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVME01000029.1 Clostridioides difficile P30 gcdP30.contig.28, whole genome shotgun sequence

⇒Summary: seq-len = 29467 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18271-18829 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVME01000039.1 Clostridioides difficile P30 gcdP30.contig.38, whole genome shotgun sequence

⇒Summary: seq-len = 312279 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 170109-171714 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVME01000024.1 Clostridioides difficile P30 gcdP30.contig.23, whole genome shotgun sequence

⇒Summary: seq-len = 406261 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 191679-192299 bp]: array | spacers
           [Locus range 397903-398259 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVME01000033.1 Clostridioides difficile P30 gcdP30.contig.32, whole genome shotgun sequence

⇒Summary: seq-len = 7410 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4973-6054 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVME01000036.1 Clostridioides difficile P30 gcdP30.contig.35, whole genome shotgun sequence

⇒Summary: seq-len = 194493 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 148108-148401 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVME01000041.1 Clostridioides difficile P30 gcdP30.contig.40, whole genome shotgun sequence

⇒Summary: seq-len = 113054 bp; # of CRISPR array = 1; # of cas gene = 5  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 59762-60841 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVME01000028.1 Clostridioides difficile P30 gcdP30.contig.27, whole genome shotgun sequence

⇒Summary: seq-len = 132691 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 131873-132698 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVME01000026.1 Clostridioides difficile P30 gcdP30.contig.25, whole genome shotgun sequence

⇒Summary: seq-len = 2734 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 88-249 bp]: array | spacers
           [Locus range 851-1673 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)