CRISPRone

CRISPRone report for GCA_000451825.1_ASM45182v1

♦ Seq 1: AVMH01000028.1 Clostridioides difficile P38 gcdP38.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 272441 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 185737-186098 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVMH01000036.1 Clostridioides difficile P38 gcdP38.contig.37, whole genome shotgun sequence

⇒Summary: seq-len = 2324 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 439-532 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVMH01000045.1 Clostridioides difficile P38 gcdP38.contig.46, whole genome shotgun sequence

⇒Summary: seq-len = 3015 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1311-1796 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVMH01000020.1 Clostridioides difficile P38 gcdP38.contig.21, whole genome shotgun sequence

⇒Summary: seq-len = 14885 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1372-1467 bp]: array | spacers
           [Locus range 4797-5152 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVMH01000032.1 Clostridioides difficile P38 gcdP38.contig.33, whole genome shotgun sequence

⇒Summary: seq-len = 68482 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4095-4519 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVMH01000044.1 Clostridioides difficile P38 gcdP38.contig.45, whole genome shotgun sequence

⇒Summary: seq-len = 297321 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 214745-215169 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVMH01000030.1 Clostridioides difficile P38 gcdP38.contig.31, whole genome shotgun sequence

⇒Summary: seq-len = 131859 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18343-18898 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVMH01000029.1 Clostridioides difficile P38 gcdP38.contig.30, whole genome shotgun sequence

⇒Summary: seq-len = 189558 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124905-125661 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVMH01000053.1 Clostridioides difficile P38 gcdP38.contig.55, whole genome shotgun sequence

⇒Summary: seq-len = 222181 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 178485-178578 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVMH01000050.1 Clostridioides difficile P38 gcdP38.contig.52, whole genome shotgun sequence

⇒Summary: seq-len = 284928 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 237590-239249 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)