CRISPRone

CRISPRone report for GCA_000451905.2_ASM45190v2

♦ Seq 1: AVML01000030.1 Clostridioides difficile P46 gcdP46.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 18961 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1916-2138 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVML01000026.1 Clostridioides difficile P46 gcdP46.contig.25, whole genome shotgun sequence

⇒Summary: seq-len = 8922 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 546-707 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVML01000041.1 Clostridioides difficile P46 gcdP46.contig.41, whole genome shotgun sequence

⇒Summary: seq-len = 241728 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVML01000037.1 Clostridioides difficile P46 gcdP46.contig.36, whole genome shotgun sequence

⇒Summary: seq-len = 119344 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61032-62438 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVML01000033.1 Clostridioides difficile P46 gcdP46.contig.32, whole genome shotgun sequence

⇒Summary: seq-len = 29809 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18213-19293 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVML01000042.1 Clostridioides difficile P46 gcdP46.contig.42, whole genome shotgun sequence

⇒Summary: seq-len = 45963 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 180-273 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVML01000051.1 Clostridioides difficile P46 gcdP46.contig.51, whole genome shotgun sequence

⇒Summary: seq-len = 191716 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 34094-34780 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVML01000039.1 Clostridioides difficile P46 gcdP46.contig.38, whole genome shotgun sequence

⇒Summary: seq-len = 104512 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 12384-12742 bp]: array | spacers
           [Locus range 58422-59505 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVML01000025.1 Clostridioides difficile P46 gcdP46.contig.24, whole genome shotgun sequence

⇒Summary: seq-len = 4076 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2894-3121 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 10: AVML01000040.1 Clostridioides difficile P46 gcdP46.contig.40, whole genome shotgun sequence

⇒Summary: seq-len = 259278 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 255165-255985 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 11: AVML01000032.1 Clostridioides difficile P46 gcdP46.contig.31, whole genome shotgun sequence

⇒Summary: seq-len = 210310 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 118210-119031 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)