CRISPRone

CRISPRone report for GCA_000451945.2_ASM45194v2

♦ Seq 1: AVMN01000031.1 Clostridioides difficile P49 gcdP49.contig.30, whole genome shotgun sequence

⇒Summary: seq-len = 413078 bp; # of CRISPR array = 1; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 253664-255516 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVMN01000029.1 Clostridioides difficile P49 gcdP49.contig.28, whole genome shotgun sequence

⇒Summary: seq-len = 238777 bp; # of CRISPR array = 1; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 236264-236758 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVMN01000023.1 Clostridioides difficile P49 gcdP49.contig.22, whole genome shotgun sequence

⇒Summary: seq-len = 29868 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18260-19276 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVMN01000021.1 Clostridioides difficile P49 gcdP49.contig.20, whole genome shotgun sequence

⇒Summary: seq-len = 238862 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 120616-121764 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVMN01000028.1 Clostridioides difficile P49 gcdP49.contig.27, whole genome shotgun sequence

⇒Summary: seq-len = 6651 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 2890-3311 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVMN01000026.1 Clostridioides difficile P49 gcdP49.contig.25, whole genome shotgun sequence

⇒Summary: seq-len = 108922 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5785-6077 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVMN01000024.1 Clostridioides difficile P49 gcdP49.contig.23, whole genome shotgun sequence

⇒Summary: seq-len = 327189 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 17295-17587 bp]: array | spacers
           [Locus range 154303-155581 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVMN01000019.1 Clostridioides difficile P49 gcdP49.contig.18, whole genome shotgun sequence

⇒Summary: seq-len = 192784 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 186379-187329 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)