CRISPRone

CRISPRone report for GCA_000452065.2_ASM45206v2

♦ Seq 1: AVMT01000038.1 Clostridioides difficile P69 gcdP69.contig.37, whole genome shotgun sequence

⇒Summary: seq-len = 27645 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 6946-7105 bp]: array | spacers
           [Locus range 8906-9130 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVMT01000034.1 Clostridioides difficile P69 gcdP69.contig.33, whole genome shotgun sequence

⇒Summary: seq-len = 1733 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 104-198 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVMT01000025.1 Clostridioides difficile P69 gcdP69.contig.24, whole genome shotgun sequence

⇒Summary: seq-len = 182381 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 118199-118623 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVMT01000033.1 Clostridioides difficile P69 gcdP69.contig.32, whole genome shotgun sequence

⇒Summary: seq-len = 272237 bp; # of CRISPR array = 2; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 482-710 bp]: array | spacers
           [Locus range 271889-271983 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVMT01000036.1 Clostridioides difficile P69 gcdP69.contig.35, whole genome shotgun sequence

⇒Summary: seq-len = 423949 bp; # of CRISPR array = 0; # of cas gene = 6  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVMT01000029.1 Clostridioides difficile P69 gcdP69.contig.28, whole genome shotgun sequence

⇒Summary: seq-len = 63501 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 16756-18494 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVMT01000024.1 Clostridioides difficile P69 gcdP69.contig.23, whole genome shotgun sequence

⇒Summary: seq-len = 272366 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 186255-186418 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVMT01000032.1 Clostridioides difficile P69 gcdP69.contig.31, whole genome shotgun sequence

⇒Summary: seq-len = 8943 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 5312-5737 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVMT01000026.1 Clostridioides difficile P69 gcdP69.contig.25, whole genome shotgun sequence

⇒Summary: seq-len = 251711 bp; # of CRISPR array = 2; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18037-18725 bp]: array | spacers
           [Locus range 193381-194727 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)