CRISPRone

CRISPRone report for GCA_000452205.2_ASM45220v2

♦ Seq 1: AVNA01000040.1 Clostridioides difficile P77 gcdP77.contig.39, whole genome shotgun sequence

⇒Summary: seq-len = 45392 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 620-977 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVNA01000033.1 Clostridioides difficile P77 gcdP77.contig.32, whole genome shotgun sequence

⇒Summary: seq-len = 69304 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4046-5196 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVNA01000021.1 Clostridioides difficile P77 gcdP77.contig.20, whole genome shotgun sequence

⇒Summary: seq-len = 13066 bp; # of CRISPR array = 3; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 4274-4698 bp]: array | spacers
           [Locus range 6302-6526 bp]: array | spacers
           [Locus range 8319-9205 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVNA01000006.1 Clostridioides difficile P77 gcdP77.contig.5, whole genome shotgun sequence

⇒Summary: seq-len = 219977 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 92005-92166 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVNA01000039.1 Clostridioides difficile P77 gcdP77.contig.38, whole genome shotgun sequence

⇒Summary: seq-len = 240657 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVNA01000038.1 Clostridioides difficile P77 gcdP77.contig.37, whole genome shotgun sequence

⇒Summary: seq-len = 82099 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 78072-78688 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVNA01000045.1 Clostridioides difficile P77 gcdP77.contig.44, whole genome shotgun sequence

⇒Summary: seq-len = 530997 bp; # of CRISPR array = 2; # of cas gene = 9  (type I) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒CRISPR arrays :
           [Locus range 254197-255339 bp]: array | spacers
           [Locus range 486892-486985 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVNA01000029.1 Clostridioides difficile P77 gcdP77.contig.28, whole genome shotgun sequence

⇒Summary: seq-len = 188876 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 124605-125164 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 9: AVNA01000030.1 Clostridioides difficile P77 gcdP77.contig.29, whole genome shotgun sequence

⇒Summary: seq-len = 96169 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 18307-18600 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)