CRISPRone

CRISPRone report for GCA_000452285.2_ASM45228v2

♦ Seq 1: AVNE01000024.1 Clostridioides difficile F480 gcdF480.contig.23, whole genome shotgun sequence

⇒Summary: seq-len = 241574 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 242-798 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: AVNE01000023.1 Clostridioides difficile F480 gcdF480.contig.22, whole genome shotgun sequence

⇒Summary: seq-len = 152038 bp; # of CRISPR array = 0; # of cas gene = 6  (type I, III) 

⇒Cas loci & CRISPR arrays: gff file

⇒Predicted cas genes: protein | gene

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 3: AVNE01000014.1 Clostridioides difficile F480 gcdF480.contig.13, whole genome shotgun sequence

⇒Summary: seq-len = 620783 bp; # of CRISPR array = 4; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 186129-186556 bp]: array | spacers
           [Locus range 390090-390512 bp]: array | spacers
           [Locus range 541265-541820 bp]: array | spacers
           [Locus range 542422-543240 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 4: AVNE01000026.1 Clostridioides difficile F480 gcdF480.contig.25, whole genome shotgun sequence

⇒Summary: seq-len = 54130 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 9905-9998 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 5: AVNE01000016.1 Clostridioides difficile F480 gcdF480.contig.15, whole genome shotgun sequence

⇒Summary: seq-len = 269355 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 61019-62759 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 6: AVNE01000015.1 Clostridioides difficile F480 gcdF480.contig.14, whole genome shotgun sequence

⇒Summary: seq-len = 55803 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 44615-45374 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 7: AVNE01000020.1 Clostridioides difficile F480 gcdF480.contig.19, whole genome shotgun sequence

⇒Summary: seq-len = 4624 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 1314-1540 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 8: AVNE01000017.1 Clostridioides difficile F480 gcdF480.contig.16, whole genome shotgun sequence

⇒Summary: seq-len = 229730 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR)

⇒Cas loci & CRISPR arrays: gff file

⇒CRISPR arrays :
           [Locus range 139530-139755 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)