CRISPRone

CRISPRone report for GCA_000455425.1_B3-CFI

♦ Seq 1: CBMS010000079.1 Pseudomonas aeruginosa B3-CFI WGS project CBMS000000000 data, contig 198_B3-CFI, whole genome shotgun sequence

⇒Summary: seq-len = 37332 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 72-10671 bp Zoom in on locus 1 x10 x19 CRISPR array Location: 72-640 bp Num of repeats: 10 Spacers: s1-s9 CRISPR array Location: 72-640 bp Num of repeats: 10 Spacers: s1-s9 Gene: cd09718:cas1 Type: universal Location: 891-1865 bp Gene: COG1203:cas3 Type: Type-I Location: 1862-5092 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 5503-6804 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 6791-7774 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 7785-8813 bp Gene: cd09739:cas6f Type: other Location: 8817-9380 bp CRISPR array Location: 9564-10671 bp Num of repeats: 19 Spacers: s10-s27 CRISPR array Location: 9564-10671 bp Num of repeats: 19 Spacers: s10-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 72-640 bp]: array | spacers
           [Locus range 9564-10671 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: CBMS010000118.1 Pseudomonas aeruginosa B3-CFI WGS project CBMS000000000 data, contig 281_B3-CFI, whole genome shotgun sequence

⇒Summary: seq-len = 1342 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 523-1271 bp Zoom in on locus 1 x13 CRISPR array Location: 523-1271 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 523-1271 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 523-1271 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)