CRISPRone

CRISPRone report for GCA_000480435.1_Pseu_aeru_3570_V1

♦ Seq 1: KI518703.1 Pseudomonas aeruginosa C48 genomic scaffold adgeZ-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 4732887 bp; # of CRISPR array = 3; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 4166997-4177694 bp Zoom in on locus 1 x17 x2 x5 CRISPR array Location: 4166997-4168003 bp Num of repeats: 17 Spacers: s1-s16 CRISPR array Location: 4166997-4168003 bp Num of repeats: 17 Spacers: s1-s16 Gene: pfam09707:cas2 Type: universal Location: 4168068-4168367 bp Gene: cd09719:cas1 Type: universal Location: 4168364-4169254 bp Gene: pfam08798:cas6e Type: other Location: 4169281-4169820 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 4169867-4170529 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 4170531-4171673 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 4171683-4172213 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 4172210-4173778 bp Gene: cd09641:cas3HD Type: Type-I Location: 4173781-4176462 bp CRISPR array Location: 4177237-4177326 bp Num of repeats: 2 Spacers: s17-s17 CRISPR array Location: 4177237-4177326 bp Num of repeats: 2 Spacers: s17-s17 CRISPR array Location: 4177421-4177694 bp Num of repeats: 5 Spacers: s18-s21 CRISPR array Location: 4177421-4177694 bp Num of repeats: 5 Spacers: s18-s21 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 4166997-4168003 bp]: array | spacers
           [Locus range 4177237-4177326 bp]: array | spacers
           [Locus range 4177421-4177694 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)