CRISPRone

CRISPRone report for GCA_000480575.1_Pseu_aeru_3096_V1

♦ Seq 1: KI518737.1 Pseudomonas aeruginosa M8A.3 genomic scaffold adger-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 3502746 bp; # of CRISPR array = 3; # of cas gene = 8  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1342308-1353616 bp Zoom in on locus 1 x22 x2 x10 CRISPR array Location: 1342308-1343620 bp Num of repeats: 22 Spacers: s1-s21 CRISPR array Location: 1342308-1343620 bp Num of repeats: 22 Spacers: s1-s21 Gene: pfam09707:cas2 Type: universal Location: 1343685-1343984 bp Gene: cd09719:cas1 Type: universal Location: 1343981-1344871 bp Gene: pfam08798:cas6e Type: other Location: 1344898-1345437 bp Gene: cd09756:cas5 Type: Subtype-I-E Location: 1345484-1346146 bp Gene: pfam09344:cas7 Type: Subtype-I-E Location: 1346148-1347290 bp Gene: cd09731:cse2gr11 Type: Subtype-I-E Location: 1347300-1347830 bp Gene: pfam09481:cas8e Type: Subtype-I-E Location: 1347827-1349395 bp Gene: cd09641:cas3HD Type: Type-I Location: 1349398-1352079 bp CRISPR array Location: 1352854-1352943 bp Num of repeats: 2 Spacers: s22-s22 CRISPR array Location: 1352854-1352943 bp Num of repeats: 2 Spacers: s22-s22 CRISPR array Location: 1353038-1353616 bp Num of repeats: 10 Spacers: s23-s31 CRISPR array Location: 1353038-1353616 bp Num of repeats: 10 Spacers: s23-s31 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1342308-1343620 bp]: array | spacers
           [Locus range 1352854-1352943 bp]: array | spacers
           [Locus range 1353038-1353616 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)