CRISPRone

CRISPRone report for GCA_000480825.1_Pseu_aeru_BL16_V1

♦ Seq 1: KI518825.1 Pseudomonas aeruginosa BL16 genomic scaffold adgeK-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 2294697 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2013094-2023538 bp Zoom in on locus 1 x12 x19 CRISPR array Location: 2013094-2013782 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 2013094-2013782 bp Num of repeats: 12 Spacers: s1-s11 Gene: cd09739:cas6f Type: other Location: 2014031-2014594 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2014598-2015626 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2015637-2016620 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2016607-2017911 bp Gene: COG1203:cas3 Type: Type-I Location: 2017969-2021199 bp Gene: cd09718:cas1 Type: universal Location: 2021196-2022170 bp CRISPR array Location: 2022431-2023538 bp Num of repeats: 19 Spacers: s12-s29 CRISPR array Location: 2022431-2023538 bp Num of repeats: 19 Spacers: s12-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2013094-2013782 bp]: array | spacers
           [Locus range 2022431-2023538 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)