CRISPRone

CRISPRone report for GCA_000480945.1_Pseu_aeru_BL10_V1

♦ Seq 1: KI518883.1 Pseudomonas aeruginosa BL10 genomic scaffold adgez-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 3169845 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 2901392-2913143 bp Zoom in on locus 1 x25 x23 CRISPR array Location: 2901392-2902861 bp Num of repeats: 25 Spacers: s1-s24 CRISPR array Location: 2901392-2902861 bp Num of repeats: 25 Spacers: s1-s24 Gene: cd09739:cas6f Type: other Location: 2903045-2903608 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 2903612-2904640 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 2904651-2905634 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 2905621-2906922 bp Gene: COG1203:cas3 Type: Type-I Location: 2907333-2910563 bp Gene: cd09718:cas1 Type: universal Location: 2910560-2911534 bp CRISPR array Location: 2911795-2913143 bp Num of repeats: 23 Spacers: s25-s46 CRISPR array Location: 2911795-2913143 bp Num of repeats: 23 Spacers: s25-s46 Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 2901392-2902861 bp]: array | spacers
           [Locus range 2911795-2913143 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KI518884.1 Pseudomonas aeruginosa BL10 genomic scaffold adgez-supercont1.2, whole genome shotgun sequence

⇒Summary: seq-len = 2328485 bp; # of CRISPR array = 1; # of cas gene = 7  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1446094-1454759 bp Zoom in on locus 1 x14 CRISPR array Location: 1446094-1446983 bp Num of repeats: 14 Spacers: s1-s13 CRISPR array Location: 1446094-1446983 bp Num of repeats: 14 Spacers: s1-s13 Gene: cd09725:cas2 Type: universal Location: 1447165-1447455 bp Gene: cd09721:cas1 Type: universal Location: 1447465-1448388 bp Gene: pfam01930:cas4 Type: Type-I Location: 1448508-1449140 bp Gene: cd09689:cas7 Type: Subtype-I-C Location: 1449159-1450028 bp Gene: cd09757:cas8c Type: Subtype-I-C Location: 1450040-1451803 bp Gene: cd09752:cas5 Type: Subtype-I-C Location: 1451800-1452474 bp Gene: cd09641:cas3HD Type: Type-I Location: 1452525-1454759 bp Sorry, your browser does not support inline SVG.

Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1446094-1446983 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)