CRISPRone

CRISPRone report for GCA_000481105.1_Pseu_aeru_BL02_V1

♦ Seq 1: KI518951.1 Pseudomonas aeruginosa BL02 genomic scaffold adggf-supercont1.3, whole genome shotgun sequence

⇒Summary: seq-len = 1588422 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 1378768-1389487 bp Zoom in on locus 1 x19 x12 CRISPR array Location: 1378768-1379876 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 1378768-1379876 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 1380059-1380622 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 1380626-1381654 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 1381665-1382648 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 1382635-1383936 bp Gene: COG1203:cas3 Type: Type-I Location: 1384347-1387577 bp Gene: cd09718:cas1 Type: universal Location: 1387574-1388548 bp CRISPR array Location: 1388800-1389487 bp Num of repeats: 12 Spacers: s19-s29 CRISPR array Location: 1388800-1389487 bp Num of repeats: 12 Spacers: s19-s29 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 1378768-1379876 bp]: array | spacers
           [Locus range 1388800-1389487 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KI518950.1 Pseudomonas aeruginosa BL02 genomic scaffold adggf-supercont1.2, whole genome shotgun sequence

⇒Summary: seq-len = 1850229 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 146863-147611 bp Zoom in on locus 1 x13 CRISPR array Location: 146863-147611 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 146863-147611 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 146863-147611 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)