CRISPRone

CRISPRone report for GCA_000481245.1_Pseu_aeru_BWH023_V1

♦ Seq 1: KI519001.1 Pseudomonas aeruginosa BWHPSA023 genomic scaffold adgeL-supercont1.1, whole genome shotgun sequence

⇒Summary: seq-len = 2431713 bp; # of CRISPR array = 2; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 258466-269065 bp Zoom in on locus 1 x19 x10 CRISPR array Location: 258466-259574 bp Num of repeats: 19 Spacers: s1-s18 CRISPR array Location: 258466-259574 bp Num of repeats: 19 Spacers: s1-s18 Gene: cd09739:cas6f Type: other Location: 259757-260320 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 260324-261352 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 261363-262346 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 262333-263634 bp Gene: COG1203:cas3 Type: Type-I Location: 264045-267275 bp Gene: cd09718:cas1 Type: universal Location: 267272-268246 bp CRISPR array Location: 268498-269065 bp Num of repeats: 10 Spacers: s19-s27 CRISPR array Location: 268498-269065 bp Num of repeats: 10 Spacers: s19-s27 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 258466-259574 bp]: array | spacers
           [Locus range 268498-269065 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KI519009.1 Pseudomonas aeruginosa BWHPSA023 genomic scaffold adgeL-supercont1.2, whole genome shotgun sequence

⇒Summary: seq-len = 1679674 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 841596-842345 bp Zoom in on locus 1 x13 CRISPR array Location: 841596-842345 bp Num of repeats: 13 Spacers: s1-s12 CRISPR array Location: 841596-842345 bp Num of repeats: 13 Spacers: s1-s12 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 841596-842345 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)