CRISPRone

CRISPRone report for GCA_000481505.1_Pseu_aeru_BWH010_V1

♦ Seq 1: KI519106.1 Pseudomonas aeruginosa BWHPSA010 genomic scaffold adgfl-supercont1.2, whole genome shotgun sequence

⇒Summary: seq-len = 1070243 bp; # of CRISPR array = 1; # of cas gene = 6  (type I) .

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 364343-373175 bp Zoom in on locus 1 x9 CRISPR array Location: 364343-364852 bp Num of repeats: 9 Spacers: s1-s8 CRISPR array Location: 364343-364852 bp Num of repeats: 9 Spacers: s1-s8 Gene: cd09739:cas6f Type: other Location: 365036-365599 bp Gene: pfam09615:cas7f Type: Subtype-I-F Location: 365603-366631 bp Gene: cd09736:cas5f Type: Subtype-I-F Location: 366642-367625 bp Gene: pfam09611:cas8f Type: Subtype-I-F Location: 367612-368916 bp Gene: COG1203:cas3 Type: Type-I Location: 368974-372204 bp Gene: cd09718:cas1 Type: universal Location: 372201-373175 bp Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒Predicted cas genes: protein | gene .

⇒CRISPR arrays :
           [Locus range 364343-364852 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)

♦ Seq 2: KI519115.1 Pseudomonas aeruginosa BWHPSA010 genomic scaffold adgfl-supercont1.9, whole genome shotgun sequence

⇒Summary: seq-len = 165656 bp; # of CRISPR array = 1; # of cas gene = 0 (Questionable CRISPR.)

⇒Visulization of predicted CRISPR-Cas system(s) .

Overview 1 Locus 1: 473-1160 bp Zoom in on locus 1 x12 CRISPR array Location: 473-1160 bp Num of repeats: 12 Spacers: s1-s11 CRISPR array Location: 473-1160 bp Num of repeats: 12 Spacers: s1-s11 Sorry, your browser does not support inline SVG.

⇒Cas loci & CRISPR arrays: gff file .

⇒CRISPR arrays :
           [Locus range 473-1160 bp]: array | spacers

⇒Miscellaneous: suspicious cas genes and/or false-CRISPRs (link)